Preprocessing and reconstruction of diffusion MRI

Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 / DWI / BOLD , and preprocessed EEG data to multi-resolution brain parcellation with corresponding connection matrices.

Red Hat CodeReady Containers (Minishift equivalent for OpenShift 4.2 or newer) - step-by-step demo guides

Open resource exchange platform for non-human primate neuroimaging

Kubernetes and Knative pipeline demo using Tekton

Example code for a possible talk at R/Medicine 2021 (submitted and under review, accepted talks not yet determined)

josh-ops.com | a devops blog

Azure DevOps CI/CD pipeline, from local Git setup to multi-stage deployment with pre-approvals, ensuring smooth production releases and overall process efficiency.

ETL oriented Celery MongoDB skeleton framework

Automate everything

Udacity Data Science Nanodegree 6th project - Starbucks Capstone Project .

we aim to predict trends in the Canadian market basket using sentiment analysis techniques. Sentiment analysis involves analyzing text data to determine the sentiment expressed, whether positive, negative, or neutral.

An analysis on crime in Los Angeles in 2020 during the COVID-19 pandemic

Predict sale prices via regression models, using PCA, k-means clustering, ensemble models, pipelines, etc.

Gene expression experiments using Python and R

Presentation on targets at the New York Open Statistical Programming Meetup

Personal website - computational molecular evolution & biopipelines

Create a pipeline that builds a Docker image and pushes it to Azure Container Registry or Docker Hub.

Working through NextFlow tutorials. See https://github.com/nextflow-io/training

The Pragmatic Programmer for Machine Learning