A tool for accurately detecting actively translating ORFs from Ribo-seq data
-
Updated
Apr 13, 2024 - Python
A tool for accurately detecting actively translating ORFs from Ribo-seq data
Pipeline for Ribosome Profiling Data
A set of easy-to-use functions to analyze end read count data of RiboMethSeq (RNA 2'Ome)
Human and mouse genome assemblies customized for rDNA mapping
Ribosome profiling mapping quality control tool
An application for analysis of 5′ endpoints distribution in RNA sequencing datasets. This is particularly useful for techniques that capture 5′ monophosphorylated RNAs, such as 5PSeq, PARE-seq or GMUC. It may also be useful for ribosome profiling datasets and alike.The main workflow of fivepseq is intended for downstream analysis of alignment fi…
Ribo-DT is a snakemake pipeline to infer single-codon and codon-pair dwell times as well as gene flux from ribosome profiling data using generalized linear model (GLM) with negative binomial noise model (Gobet et al., PNAS, 2020).
Cellular economy models for simulation of biological optimizaton problems
Fast data processing for ribosome footpring profiling experiments from bam files
Sublime Text plugin for the Ribosome code generator
Programas usados em BioInformática
Comparison of the ability of open reading frames to recruit ribosomes within individual transcripts
Datatypes for the ribosome.
Add a description, image, and links to the ribosome topic page so that developers can more easily learn about it.
To associate your repository with the ribosome topic, visit your repo's landing page and select "manage topics."