A comprehensive pipeline for RNAseq data analysis
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Updated
Aug 31, 2024 - Shell
A comprehensive pipeline for RNAseq data analysis
These are tutorials on a subset of tools available for processing raw RNAseq data. This if for HISAT2_SAMtools_Stringtie_gffcompare_ballgown pipeline or HISAT2_SAMtools_Stringtie_PrepDEanalysis.py_DESeq2 pipeline
pilot pipeline that includes tool containerization
A basic pipeline for the analysis of RNASeq data. Entirely done in Bash and R script.
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