twas
Here are 15 public repositories matching this topic...
Factored QTL analysis applied to GTEx and GWAS of 114 complex traits
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Apr 27, 2020 - R
Bioinformatic software to identify causal variants in GWAS and GWAS/eQTL studies.
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Dec 11, 2017 - C++
tool for continuously integrated meta-resource
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Mar 25, 2021 - Python
Optimizing transcriptome prediction models for use in multi-ethnic TWAS using multivariate adaptive shrinkage.
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Jul 17, 2023 - R
Analysis of transcriptome imputation using paired genotype-expression data from SAGE and GEUVADIS
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Jul 1, 2020 - R
R package for "Multi-tissue Transcriptome-Wide Association Studies (MTWAS)"
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Jul 15, 2024 - R
Multilayer modelling of the human transcriptome and biological mechanisms of complex diseases and traits
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Jun 2, 2021 - Jupyter Notebook
PhenoPLIER
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Apr 8, 2024 - Jupyter Notebook
Tool for integrative gene-based association analysis using GWAS summary stats
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Aug 28, 2019 - C++
Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform GWAS/TWAS on complex trait.
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Jun 18, 2023 - Shell
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