Small pure Perl5 libraries for writing command line bioinformatics tools
This is a Github template for my Perl based bioinformatics tools.
- search and replace
perl-biotool
with the name of your repo - enable TRAVIS-CI for the repo
% perl-biotool --version
perl-biotool 0.1.2
Install Bioconda then:
conda install -c conda-forge -c bioconda -c defaults perl-biotool # COMING SOON
Install Homebrew (Mac OS X) or Linuxbrew (Linux) then:
brew install brewsci/bio/perl-biotool # COMING SOON
This will install the latest version direct from Github.
You'll need to add the perl-biotool bin
directory to your $PATH
,
and also ensure all the dependencies are installed.
cd $HOME
git clone https://github.com/tseemann/perl-biotool.git
$HOME/perl-biotool/bin/perl-biotool --help
perl
>= 5.26
perl-biotool is free software, released under the GPL 3.0.
Please submit suggestions and bug reports to the Issue Tracker