Skip to content

Releases: welch-lab/cytosignal

Version 0.2.0

09 Mar 02:26
Compare
Choose a tag to compare
Version 0.2.0 Pre-release
Pre-release

We've updated the algorithm to make it more efficient and mathematically compliant for LR-score and LR-velo computation by implementing the following changes:

  1. The input raw data is pre-subsetted to include only interaction genes, which reduces computational costs by up to 20 times.
  2. The procedure for LR-score has been simplified and cell-level scores are inferred directly to obtain more accurate results and increase mathematical compliance.
  3. The LR-velo is now imputed using the same strategy as for the ligands and receptors individually.

Version 0.1.0

09 Mar 18:51
Compare
Choose a tag to compare
Version 0.1.0 Pre-release
Pre-release

In this exciting debut of CytoSignal and VeloCytoSignal, we have crafted a tool that is both versatile and intuitive. Our users are empowered to select their preferred method for deducing diffusible or non-diffusible ligand and receptors, as well as the pre-constructed interaction database they wish to analyze.