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add UMAP #10

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jonathanronen opened this issue Jul 29, 2018 · 0 comments
Open

add UMAP #10

jonathanronen opened this issue Jul 29, 2018 · 0 comments
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enhancement

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@jonathanronen
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Currently, netSmooth uses PCA or tSNE for dimensionality reduction, clustering, and robustness. We should also implement UMAP for this.

  • find the most suitable umap library for R
  • add support for this in netSmooth
jonathanronen added a commit that referenced this issue Oct 31, 2018
@jonathanronen
Merge pull request #12 from nagoli104/hdf5_support
72a2d75 
HDF5 support (#9), UMAP for for dimensionality reduction (#10)
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