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modelmatcher changes #72

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@arteymix arteymix self-assigned this May 25, 2021
@arteymix arteymix added this to the 1.4 milestone May 25, 2021
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@lucianli123 Have you found gene information for fission yeast?

}
else{
data=new HashSet<>();
}
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We need to handle the error if a registry is missing a taxon.

@@ -50,11 +50,12 @@ public void updateOrganInfos() {
OrganInfo organInfo = organInfoRepository.findByUberonId( term.getId() );
if ( organInfo == null ) {
organInfo = new OrganInfo();
organInfo.setName( term.getName() );
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We need to add the description here as well.

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It's a bit silly if we do that because we can only add missing organ systems, never update anything.

@@ -49,7 +49,7 @@
th:checked="${gene.tier == T(ubc.pavlab.rdp.model.enums.TierType).TIER1}"/>
</td>
<td th:if="${viewOnly != null}"
th:text="${gene.tier}"
th:text="${gene.tier==T(ubc.pavlab.rdp.model.enums.TierType).TIER1}?'Primary':'Secondary'"
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Here we should use the labels from the TierType, and possible use i18n to allow instance to change the wording.

@arteymix arteymix removed this from the 1.4 milestone Jun 4, 2021
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arteymix commented Jun 4, 2021

I'll review the changes later. I think most of these have already been addressed in the 1.4 and any issues could be fixed in a patch release.

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arteymix commented Jun 9, 2021

@lucianli123 You should rebase this change on the master branch, it contains the latest 1.4.1 release. I can help you out if you have merge issues.

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2 participants