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@PavlidisLab

Pavlidis lab

The Pavlidis Lab at the University of British Columbia

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  1. neuroexpresso neuroexpresso Public

    📊 Gene expression in neuroexpresso database

    R 17 1

  2. Gemma Gemma Public

    Genomics data re-analysis

    Java 21 6

  3. markerGeneProfile markerGeneProfile Public

    Marker gene profile estimation method used in NeuroExpresso manuscript

    R 12 2

Repositories

Showing 10 of 61 repositories
  • GemBrow Public

    The Gemma Browser

    PavlidisLab/GemBrow’s past year of commit activity
    Vue 3 Apache-2.0 1 24 1 Updated Jul 17, 2024
  • Gemma Public

    Genomics data re-analysis

    PavlidisLab/Gemma’s past year of commit activity
    Java 21 Apache-2.0 6 293 30 Updated Jul 13, 2024
  • gemmapy Public
    PavlidisLab/gemmapy’s past year of commit activity
    Python 6 Apache-2.0 1 7 2 Updated Jul 12, 2024
  • gemma.R Public

    An R wrapper for the Gemma RESTful API

    PavlidisLab/gemma.R’s past year of commit activity
    R 10 Apache-2.0 1 8 0 Updated Jul 10, 2024
  • TR_singlecell Public
    PavlidisLab/TR_singlecell’s past year of commit activity
    R 0 MIT 0 0 0 Updated Jul 9, 2024
  • rnaseq-pipeline Public

    RNA-seq pipeline for raw sequence alignment and transcript/gene quantification.

    PavlidisLab/rnaseq-pipeline’s past year of commit activity
    Python 21 Unlicense 4 38 1 Updated Jul 3, 2024
  • gsec Public

    Reusable implementation of the Spring Security framework for lab projects

    PavlidisLab/gsec’s past year of commit activity
    Java 0 Apache-2.0 0 2 6 Updated Jun 27, 2024
  • pavlab-starter-parent Public

    Curated dependencies for the Pavlidis Lab's Java applications

    PavlidisLab/pavlab-starter-parent’s past year of commit activity
    0 Apache-2.0 0 8 1 Updated Jun 27, 2024
  • SFARI_project Public
    PavlidisLab/SFARI_project’s past year of commit activity
    HTML 1 0 0 0 Updated Jun 26, 2024
  • rdp Public

    Researcher Gene Registry. Originally developed for the Canadian Rare Disease Models & Mechanisms Network

    PavlidisLab/rdp’s past year of commit activity
    Java 5 Apache-2.0 6 144 4 Updated Jun 21, 2024
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