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Added an option to output a side-vcf with variants detected by assembly #7384

Merged
merged 5 commits into from
Oct 29, 2021
Merged

Added an option to output a side-vcf with variants detected by assembly #7384

merged 5 commits into from
Oct 29, 2021

Commits on Aug 5, 2021

  1. added debug variant output argument to the HaplotypeCaller

    @jamesemery
    jamesemery committed Aug 5, 2021
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  2. added support to this for Mutect2

    @jamesemery
    jamesemery committed Aug 5, 2021
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  3. making sure to close the writer on both sides

    @jamesemery
    jamesemery committed Aug 5, 2021
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  4. merged

    @jamesemery
    jamesemery committed Aug 5, 2021
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Commits on Aug 6, 2021

  1. getting rid of a depricated class reference

    @jamesemery
    jamesemery committed Aug 6, 2021
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