Add flag to (optionally) zero pad the vcf filename. #7783
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rsasch
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Apr 19, 2022
Also (optionally) change the naming of the intervals file to match that of the VCFs
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This was referenced Mar 17, 2023
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This PR changes GvsExtractCallset to optionally pad the output VCFs with a leading zero. They are named in a similar fashion to the (also optionally renamed) interval list shards.
If the input
zero_pad_output_vcf_filenamesis set to true (the default) the VCFs and interval files will be named as such:An example workflow is here
If the input
zero_pad_output_vcf_filenamesis set to false, the workflow will name things as it has in the past:An example workflow is here