Pipeline for generating RNAseq-based cancer patient reports
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Updated
Sep 3, 2024 - R
Pipeline for generating RNAseq-based cancer patient reports
A comprehensive pipeline for RNAseq data analysis
This tutorial is created for educational purpose
RNA-seq for rare diseases pipeline using nextflow
Snakemake workflow designed to perform RNASeq transcrpotime expression estimation with Salmon
PISCES is a pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries using Salmon.
RNA-seq replication analysis.
A python package for working with inputs to and outputs from the toil-rnaseq pipeline
A book that discusses topics and contains tutorials relevant to population genomics
pilot pipeline that includes tool containerization
In this repository : i have created RNAseq pipeline using snakemake rules
Introduction to Bioinformatics workflows with Nextflow
Simple Snakemake RNA-Seq pipeline
Docker Integrated Comparison of Alternative Splicing (AS) Tools. Benchmarking AS tools and genomic alignment tools.
Pipeline for calling and analyzing variants from RNA-Seq data
These snakefiles are prepared for the snakemake pipeline for the RNASeq analysis
Snakemake+singularity RNAseq processing pipeline
A script to analyze with DESeq2 data from Kallisto. You maybe are interested only in DESeq2 part and its analisis and representation :)
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