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Releases: vmikk/biodiverse-docker

v.1.5.0

22 Mar 09:46
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  • Update to Biodiverse v4.99_002
  • Update Biodiverse Utils to 1.09
  • Update base image to Ubuntu 23.10 (due to freexl>=2.0.0 dependencies)
  • Update multiple Perl dependencies

Biodiverse changelog: Development release version 4.99

v.1.3.0

24 May 09:09
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Update to Biodiverse v4.3
Changelog:

Images at DockerHub and Singularity Library are based on shawnlaffan/biodiverse@76fd253

v.1.2.0

15 Mar 13:59
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Update Biodiverse to v.4.1 (see the changelog),
which includes phylogenetic endemism optimizations, as well as fix for NRI, NTI and Net VPD indices.

Images at DockerHub and Singularity Library are based on shawnlaffan/biodiverse@d70b531

v.1.0.0

22 Dec 10:52
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Update Biodiverse to v.4.0 (see the changelog).
Images at DockerHub and Singularity Library are based on shawnlaffan/biodiverse@c27cb9c

v.0.0.2

22 Dec 10:44
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Remove perlbrew as a dependency.
Using system Perl (v.5.30) now.
Containers were based on the following definition files: Dockerfile_NoPerlbrew and SingularityDef_NoPerlbrew.def.

v.0.0.1

22 Apr 08:00
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Singularity and Docker images, v.0.0.1

v0.01

07 Feb 19:19
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v0.01 Pre-release
Pre-release

Image was successfully created.
Almost all Biodiverse tests are passing, except:

t/11-BaseData-import-feature-data.t                     (Wstat: 512 Tests: 6 Failed: 1)
  Failed test:  6
  Non-zero exit status: 2
  Parse errors: No plan found in TAP output
t/28-Randomisation2.t                                   (Wstat: 256 Tests: 43 Failed: 1)
  Failed test:  2
  Non-zero exit status: 1
t/30-Progress.t                                         (Wstat: 256 Tests: 2 Failed: 1)
  Failed test:  2
  Non-zero exit status: 1
Files=62, Tests=3971

Image size ~2.65GB.