🦐 Oceananigans v0.23.0

Oceananigans v0.23.0

Diff since v0.22.0

Closed issues:

• More modular and reproducible 3D plotting script (#203)
• Make checkpointer more memory efficient (#416)
• Checkpointer warning if properties included make restoring impossible (#417)
• Should Model be renamed to IncompressibleModel or BoussinesqModel? (#566)
• Storing boundary conditions inside fields (#606)
• Make Julia 1.3 the new minimum required version? (#625)
• Flux boundary condition with two components (#629)
• Register Oceananigans v0.22.0 (#630)
• README is out of date (#633)
• Error when setting GPU field using CuArray (#634)

Merged pull requests:

• Rename Model to IncompressibleModel (#626) (@ali-ramadhan)
• Ability to construct field tuples with non-zero data (#627) (@ali-ramadhan)
• Simplify checkpointer and make it work for large models (#628) (@ali-ramadhan)
• Upgrade fields to store boundary conditions (#631) (@ali-ramadhan)
• Import CUDAnative in Fields submodule (#635) (@ali-ramadhan)
• Make Julia 1.3 the new minimum required version (#636) (@ali-ramadhan)

✈️ Oceananigans v0.22.0

Oceananigans v0.22.0

Diff since v0.21.0

Closed issues:

• Make progress statements a part of time_step! (#432)
• Use FT for "floating point type" (#446)
• 'Simulation' type for managing time stepping (#447)
• Use less defaults in model construction? (#459)
• Grid Topology concept (#489)
• Updating the code the "normal" way (#598)

Merged pull requests:

• Grids now have a topology (#614) (@ali-ramadhan)
• Create field boundary conditions using information from grid topology (#620) (@ali-ramadhan)
• High-level Simulation type to manage time stepping (#621) (@ali-ramadhan)
• Differentiated and variable AMD model constants (#622) (@glwagner)
• Allow 2D GPU models (#623) (@ali-ramadhan)

🍩 Oceananigans v0.21.0

Oceananigans v0.21.0

Diff since v0.20.0

Closed issues:

• Notation for non-traditional f-plane is obscure (#616)

Merged pull requests:

• Fixes off-by-one indexing error in hydrostatic pressure integrat… (#612) (@glwagner)
• Purge famous people (#613) (@ali-ramadhan)
• Changes notation for NonTraditionalFPlane (#617) (@glwagner)
• Changes Timeseries to TimeSeries (#618) (@glwagner)
• Install TagBot as a GitHub Action (#619) (@JuliaTagBot)

🎏 Oceananigans v0.20.0

v0.20.0 (2020-01-31)

Diff since v0.19.0

Closed issues:

• TemperatureBuoyancy for evolving temperature without salinity (#581)
• Output extraction via Dict generator in JLD2OutputWriter fails when outputting fields directly (#562)
• Poisson solver that allows for variable vertical grid spacing. (#46)

Merged pull requests:

• Settable boundary conditions for LES diffusivities (#601) (glwagner)
• SeawaterBuoyancy with constant temperature or constant salinity (#595) (glwagner)
• Non-traditional f-plane (#577) (suyashbire1)

♻️ Oceananigans v0.19.0

v0.19.0 (2020-01-14)

Diff since v0.18.1

Closed issues:

• Conflicting identifiers (#563)
• Ranges are Float64 even if FT=Float32 is passed to RegularCartesianGrid (#544)
• More local import statements. (#497)
• What should be split into submodules? (#495)
• More modules / hierarchical code structure (#456)
• Vertically stretched Cartesian grid (#47)

Merged pull requests:

• Submodules for everything! (#591) (ali-ramadhan)
• Pressure solvers for everything! (#589) (ali-ramadhan)
• Vertically stretched Cartesian grid (#543) (ali-ramadhan)
• Pressure solver for vertically stretched grids (#306) (ali-ramadhan)

🎆 Oceananigans v0.18.1

v0.18.1 (2020-01-04)

Diff since v0.18.0

Closed issues:

• We should get rid of the BoundaryConditions alias (#582)
• Switch tests to use the new logger (#578)
• Switching to Plots.jl and unbreaking the example tests (#536)
• Add section on "using GPUs" to documentation (#483)
• Document vertical integral of buoyancy (#482)
• Benchmark scripts should report CPU and GPU being used (#466)

Merged pull requests:

• Clean up dependencies (#588) (ali-ramadhan)
• Switch Tests to use the new logger (#585) (arcavaliere)
• Fix documentation homepage (#584) (ali-ramadhan)
• Remove BoundaryConditions alias (#583) (ali-ramadhan)

🎄 Oceananigans v0.18.0

v0.18.0 (2019-12-19)

Diff since v0.17.0

Major features:

• Major improvements to documentation.
• Submission to Journal of Open Source Software.

Closed issues:

• set! for vertical profiles (#542)
• Ωᵉᵃʳᵗʰ default for Coriolis constructors? (#510)
• Should we make z the fast index? (#470)
• Merge Oceananigans.Operators with closure\_operators.jl (#460)
• Verification experiments should become sophisticated tests (#347)
• Some Poisson solver tests, e.g. test_3d_poisson_ppn_planned!_div_free, fail when using FFTW.MEASURE or FFTW.PATIENT. (#99)

Merged pull requests:

• Sometimes if you wait tests fix themselves (#575) (ali-ramadhan)
• Fix and test RoquetIdealizedNonlinearEquationOfState (#574) (ali-ramadhan)
• Bugfix in SurfaceWaves module (#571) (glwagner)
• Major documentation refactoring for JOSS (#570) (ali-ramadhan)
• Fix launch_config for BatchedTridiagonalSolver (#569) (ali-ramadhan)
• Fix typos in cell\_diffusion\_timescale methods. (#557) (ali-ramadhan)
• Add default Ω_Earth and R_Earth for FPlane and BetaPlane (#550) (ali-ramadhan)

🎁 Oceananigans v0.17.0

v0.17.0 (2019-12-12)

Diff since v0.16.0

Main features:

• Model setup documentation
• General-purpose batched tridiaginal solver.
• A new logger that's better than the default one.
• Support for horizontal/channel boundary conditions.
• Several bug fixes.

Closed issues:

• NetCDFOutputWriter errors when given outputs as named tuple (#553)
• Document convinient unit definitions (#545)
• Need to test that time stepping works with all diffusivity closures (#539)
• Large JLD2 file has invaded our git history (#509)
• Logging. (#71)

Merged pull requests:

• Bump version v0.17.0 (#567) (ali-ramadhan)
• Update stratified Couette flow verification experiment for JOSS (#561) (ali-ramadhan)
• Update public API documentation (#560) (ali-ramadhan)
• On CI servers select the GPU with the most memory (#559) (ali-ramadhan)
• Delete leftover JLD2 files before deploying docs (#558) (ali-ramadhan)
• Update NetCDFOutputWriter docstring and clobber default (#556) (ali-ramadhan)
• Update DiffusiveCFL docstring (#554) (ali-ramadhan)
• Banners like ##### instead of #### (#551) (ali-ramadhan)
• Test time-stepping with all turbulent diffusivity closures (#549) (ali-ramadhan)
• Document convinient unit definitions (#548) (ali-ramadhan)
• Support for applying channel boundary conditions (#546) (ali-ramadhan)
• Model setup documentation for JOSS (#534) (ali-ramadhan)
• General-purpose batched tridiagonal solver (#533) (ali-ramadhan)
• Logging (#478) (arcavaliere)

🏒 Oceananigans v0.16.0

v0.16.0 (2019-12-02)

Diff since v0.15.0

Main feature:

• Finite volume operators.

Closed issues:

• Multiple warnings about "incremental compilation may be fatally broken for this module" (#537)
• Large JLD2 file has invaded our git history (#509)
• Supressing harmless warning and error messages (#366)
• Broadcasting and operations on different Field types (#12)

Merged pull requests:

• Add compat bounds for Cassette (#541) (ali-ramadhan)
• Get rid of method redefinition warnings during precompile stage (#538) (ali-ramadhan)
• Integrate finite volume operators (#529) (ali-ramadhan)
• Fixes a typo in Eady example and in Docs (#527) (navidcy)
• Regenerate regression test data following reversal of k index (#526) (ali-ramadhan)

🏄 Oceananigans v0.15.0

Main features:

• Multiple turbulence closures per tracer (#517)
• Anisotropic biharmonic diffusivity closure (#518)
• Craik-Leibovich terms and surface waves effects (#519)
• BoundaryFunction wrapper for simple boundary condition functions (#513)
• Start splitting code into submodules (#512)